
How does CIS work for subcontractors?
The Construction Industry Scheme (CIS) is how HMRC collects tax from people working in construction. When a contractor pays you, they take a deduction from the labour part of your invoice and pass it to HMRC. The deduction is not an extra tax. It is an advance payment towards your own income tax and National Insurance.
| Your CIS status | Deduction from labour |
|---|---|
| Registered subcontractor | 20% |
| Not registered for CIS | 30% |
| Gross payment status | 0% |
Deductions should come off labour only, not materials. If a contractor deducts from the whole invoice, you lose money until it is put right. We check your payment statements against your invoices so this is caught early.
The common mistakes we look out for are simple ones that cost real money:
- Deductions taken at 30% because your registration was not matched to the contractor’s records
- Payment statements that are missing, late or show the wrong figures
- Materials you bought counted as labour, so too much tax is deducted
- Expenses such as tools, van costs and fuel left off the tax return
- Returns filed late, which delays the refund and can add penalties
Keeping a copy of every invoice and every statement, month by month, is the easiest way to avoid most of these problems. A photo on your phone is fine. We can give you a simple way to send them to us as you go.
How do I get a CIS tax refund?
If you are a self-employed subcontractor, you get overpaid deductions back through your Self Assessment tax return. The refund comes after the return is filed, so filing early in the year means getting your money sooner. You do not have to wait for the 31 January deadline.
Say you invoiced £40,000 of labour and had £8,000 deducted at 20%. Your allowable expenses were £10,000, so your profit is £30,000. Income tax is 20% of (£30,000 minus the £12,570 Personal Allowance), which is £3,486. Class 4 National Insurance is 6% of the same £17,430, which is £1,045.80. Your total bill is £4,531.80. You have already paid £8,000, so about £3,468 comes back to you, assuming you have no other income.
- 1
Gather your statements
We collect the monthly CIS statements from each contractor and chase any that are missing.
- 2
Add up your expenses
Tools, van costs, fuel, materials you paid for, workwear, phone and insurance all reduce your profit.
- 3
File your return
We prepare and file your Self Assessment return as soon as the tax year ends on 5 April.
- 4
Receive the refund
HMRC repays the overpaid tax to your bank account once the return is processed.
If you trade through a limited company, the process is different. The company offsets the deductions against its own PAYE and CIS bill through the Employer Payment Summary, or claims a repayment from HMRC after the tax year. Our guide on how to claim a CIS tax refund covers both routes.
Can I get paid without CIS deductions?
Yes, if you qualify for gross payment status. Contractors then pay you in full and you settle your tax through your return. HMRC looks at four things.
- Compliance: you have paid tax and filed returns on time in the past.
- Work: you do construction work in the UK.
- Bank account: you run the business through a bank account.
- Turnover: over the last 12 months, excluding VAT and materials, at least £30,000 as a sole trader. Partnerships need £30,000 per partner or £100,000 in total, and companies £30,000 per director or £100,000 in total.
What if I pay subcontractors myself?
As soon as you pay other trades for construction work, you are a contractor under CIS. You must check each subcontractor with HMRC, take the right deduction and file a CIS return by the 19th of every month. You also give each subcontractor a statement of what you deducted.
We run this for you as part of our payroll, PAYE and CIS service. We verify new subcontractors, file the monthly return and send out the statements, so the deadline never sneaks up on you mid-job. If you are VAT registered, we also make sure the VAT domestic reverse charge is applied correctly to the building work you invoice and receive.
What does a CIS accountant cost?
Our fees are fixed and monthly. Sole traders start from £99 a month and limited companies from £150 a month. That covers your tax return or accounts, CIS checks and advice when you need it. You get the exact price in writing within one working day after a free 20-minute chat, and it stays the same for 12 months unless your business changes. Full details are on our fees page.
Already with another accountant? We can switch you over at any time of year. We write to your old accountant, collect your records and deal with HMRC. You sign one form.
Common questions
How long does a CIS tax refund take?
The refund is paid after your Self Assessment return is filed and processed by HMRC. Filing soon after 5 April means you get it months earlier than waiting for the 31 January deadline.
Can I claim back CIS deductions from previous years?
If you never filed a return for an earlier year, you may still be able to claim. We look at your statements and any missing returns, and deal with penalties if returns were late. Our late tax returns service covers this.
Should CIS be deducted from materials?
No. Deductions apply to the labour part of the payment only. If materials are shown separately on your invoice, they should be paid in full.
Do I need to register for CIS as a subcontractor?
You do not have to, but if you are not registered contractors must deduct 30% instead of 20%. Registering is free and usually worth doing straight away.
Do you work with trades outside Liverpool?
Yes. You can visit our Galloway Street office by appointment, or we can work by phone, video and email with trades anywhere in the UK.

